BioInt
1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
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get3PrimeClip() :
BioFeatures
get3PrimeSiteValue() :
BioFTQConsSplice
get3PrimeUtr() :
BioFeatures
get5PrimeClip() :
BioFeatures
get5PrimeSiteValue() :
BioFTQConsSplice
get5PrimeUtr() :
BioFeatures
get_() :
BioFeatures
get_10Signal() :
BioFeatures
get_35Signal() :
BioFeatures
get_a() :
BioHkl
get_a_star() :
BioHkl
get_alpha() :
BioHkl
get_alpha_star() :
BioHkl
get_b() :
BioHkl
get_b_star() :
BioHkl
get_beta() :
BioHkl
get_beta_star() :
BioHkl
get_c() :
BioHkl
get_c_star() :
BioHkl
get_gamma() :
BioHkl
get_gamma_star() :
BioHkl
get_h() :
BioHkl
get_k() :
BioHkl
get_l() :
BioHkl
getA() :
BioEmblSq
,
BioPdbCryst1
getAb() :
BioPubmedAb
getAccessibleSurfaceArea() :
BioAminoAcid
getAccession() :
BioGenBankAccession
getAccessionNumber() :
BioRestrictionEnzymeLibrary
,
BioFTQUsedIn
,
BioGenBankVersion
getAccValMov() :
BioDnaSequenceAlignment
,
BioProteinSequenceAlignment
,
BioDnaSequenceAlignment
,
BioProteinSequenceAlignment
,
BioDnaSequenceAlignment
,
BioProteinSequenceAlignment
,
BioDnaSequenceAlignment
,
BioProteinSequenceAlignment
,
BioDnaSequenceAlignment
,
BioProteinSequenceAlignment
getActSite() :
BioSwissProtFt
getAd() :
BioPubmedAd
getAdjacencyMatrix() :
BioGraph
getAid() :
BioPubmedAid
,
BioPubmedSingleAid
getAlias() :
BioPsiTabInteractor
getAlignedFragmentLength() :
BioSingleBlast
getAlignedRepeat() :
BioDnaMultiPatternAlignment
,
BioProteinMultiPatternAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
getAlignedSequence() :
BioMultipleSequenceAlignment
getAlignedSequence1() :
BioDnaSequenceGlobalAlignment
,
BioProteinSequenceGlobalAlignment
,
BioDnaSequenceLocalAlignment
,
BioProteinSequenceLocalAlignment
,
BioDnaSequenceOverlapAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
getAlignedSequence2() :
BioDnaSequenceLocalAlignment
,
BioProteinSequenceLocalAlignment
,
BioDnaSequenceOverlapAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
,
BioDnaSequenceGlobalAlignment
,
BioProteinSequenceGlobalAlignment
getAlignedSequenceInFasta() :
BioMultipleSequenceAlignment
getAlignedSequenceName() :
BioMultipleSequenceAlignment
getAlignedSequences() :
BioMultipleSequenceAlignment
getAlignedSequencesInMultipleFasta() :
BioMultipleSequenceAlignment
getAlignment() :
BioBlast
,
BioSingleBlast
getAllele() :
BioFTQAllele
getAllNullProbeIndexList() :
BioDataSet
getAllNullSampleIndexList() :
BioDataSet
getAlpha() :
BioPdbCryst1
getAlternateId() :
BioPsiTabInteractor
getAmbigousRestrictionEnzymes() :
BioRestrictionEnzymeLibrary
getAminoAcid() :
BioAminoAcidLibrary
,
BioProteinSequence
getAminoAcidName() :
BioAminoAcid
getAminoAcidPosition() :
BioProteinSubstitutionMatrix
getAntiCodonAminoAcid() :
BioFTQAntiCodon
getAtcc() :
BioPdbSingleSource
getAtom() :
BioResidue
getAtomicMass() :
BioElement
getAtomicNumber() :
BioElement
getAtomicRadius() :
BioElement
getAtomicScatteringFactor() :
BioElement
getAtomIndex() :
BioResidue
getAtomName() :
BioAtom
getAtomNumber() :
BioAtom
getAtomRecord() :
BioAtom
getAttenuator() :
BioFeatures
getAu() :
BioPubmedAu
,
BioPubmedSingleAu
getAuthorName() :
BioPsiTabInteractionLiteratureReference
getAverageAccessibleArea() :
BioAminoAcid
getAverageBfactor() :
BioChain
getAverageBuriedArea() :
BioAminoAcid
getAverageClusteringCoefficient() :
BioGraph
getAverageOfProbeSets() :
BioDataSet
getAverageOfSampleSets() :
BioDataSet
getB() :
BioPdbCryst1
getBase() :
BioFTLSingleBase
,
BioDnaSequence
getBasePosition() :
BioFTLSingleBase
getBaseRange() :
BioFTLBaseRange
getBeta() :
BioPdbCryst1
getBfactor() :
BioAtom
getBinding() :
BioSwissProtFt
getBiologicalUnit() :
BioPdbSingleCompnd
getBoundMoiety() :
BioFTQBoundMoiety
getBraggAngle() :
BioHkl
getC() :
BioEmblSq
,
BioPdbCryst1
getCAATSignal() :
BioFeatures
getCaBind() :
BioSwissProtFt
getCAlphaRmsd() :
BioProteinStructureAlignment
getCarbohyd() :
BioSwissProtFt
getCc() :
BioEmblCc
getCcAllergen() :
BioSwissProtCcAllergen
,
BioSwissProtCc
getCcAlternativeProducts() :
BioSwissProtCc
getCcBioTechnology() :
BioSwissProtCc
,
BioSwissProtCcBioTechnology
getCcCatalyticActivity() :
BioSwissProtCc
,
BioSwissProtCcCatalyticActivity
getCcCaution() :
BioSwissProtCc
,
BioSwissProtCcCaution
getCcCoFactor() :
BioSwissProtCc
,
BioSwissProtCcCoFactor
getCcComment() :
BioSwissProtCcAlternativeProducts
getCcDatabase() :
BioSwissProtCc
getCcDatabaseFTP() :
BioSwissProtCcDatabase
getCcDatabaseName() :
BioSwissProtCcDatabase
getCcDatabaseNote() :
BioSwissProtCcDatabase
getCcDatabaseWWW() :
BioSwissProtCcDatabase
getCcDevelopmentalStage() :
BioSwissProtCc
,
BioSwissProtCcDevelopmentalStage
getCcDisease() :
BioSwissProtCc
,
BioSwissProtCcDisease
getCcDomain() :
BioSwissProtCc
,
BioSwissProtCcDomain
getCcEnzymeRegulation() :
BioSwissProtCc
,
BioSwissProtCcEnzymeRegulation
getCcEvent() :
BioSwissProtCcAlternativeProducts
getCcFunction() :
BioSwissProtCc
,
BioSwissProtCcFunction
getCcInduction() :
BioSwissProtCc
,
BioSwissProtCcInduction
getCcIsoId() :
BioSwissProtCcAlternativeProducts
getCcMassSpectrometry() :
BioSwissProtCc
getCcMassSpectrometryMethod() :
BioSwissProtCcMassSpectrometry
getCcMassSpectrometryMW() :
BioSwissProtCcMassSpectrometry
getCcMassSpectrometryMW_ERR() :
BioSwissProtCcMassSpectrometry
getCcMassSpectrometryRange() :
BioSwissProtCcMassSpectrometry
getCcMiscellaneous() :
BioSwissProtCc
,
BioSwissProtCcMiscellaneous
getCcName() :
BioSwissProtCcAlternativeProducts
getCcNamedIsoforms() :
BioSwissProtCcAlternativeProducts
getCcNote() :
BioSwissProtCcAlternativeProducts
getCcNumberOfIsoIds() :
BioSwissProtCcAlternativeProducts
getCcNumberOfNames() :
BioSwissProtCcAlternativeProducts
getCcNumberOfNotes() :
BioSwissProtCcAlternativeProducts
getCcNumberOfSequences() :
BioSwissProtCcAlternativeProducts
getCcNumberOfSynonyms() :
BioSwissProtCcAlternativeProducts
getCcPathWay() :
BioSwissProtCc
,
BioSwissProtCcPathWay
getCcPharmaceutical() :
BioSwissProtCc
,
BioSwissProtCcPharmaceutical
getCcPolymorphism() :
BioSwissProtCc
,
BioSwissProtCcPolymorphism
getCcPtm() :
BioSwissProtCc
,
BioSwissProtCcPtm
getCcRnaEditing() :
BioSwissProtCc
,
BioSwissProtCcRnaEditing
getCcSequence() :
BioSwissProtCcAlternativeProducts
getCcSimilarity() :
BioSwissProtCc
,
BioSwissProtCcSimilarity
getCcSubCellularLocation() :
BioSwissProtCc
,
BioSwissProtCcSubCellularLocation
getCcSubUnit() :
BioSwissProtCc
,
BioSwissProtCcSubUnit
getCcSynonyms() :
BioSwissProtCcAlternativeProducts
getCcTissueSpecificity() :
BioSwissProtCc
,
BioSwissProtCcTissueSpecificity
getCds() :
BioFeatures
getCell() :
BioPdbSingleSource
getCellLine() :
BioFTQCellLine
,
BioPdbSingleSource
getCellType() :
BioFTQCellType
getCellularLocation() :
BioPdbSingleSource
getCentroid() :
BioChain
,
BioResidue
getCFHelixPropensity() :
BioAminoAcid
getCFSheetPropensity() :
BioAminoAcid
getCFTurnPositionProbability() :
BioAminoAcid
getCFTurnPropensity() :
BioAminoAcid
getChain() :
BioPdbSingleCompnd
,
BioSwissProtFt
getChainId() :
BioChain
,
BioWater
getChainSegment() :
BioChain
,
BioProteinChain
getChromosome() :
BioFTQChromosome
getCi() :
BioPubmedCi
getCitation() :
BioFTQCitation
,
BioEst
getClass() :
BioScop171
getClassId() :
BioScopClass
getClassification() :
BioPdbHeader
getCleanDataSet() :
BioDataSet
getCleanProbeIndexList() :
BioDataSet
getCleanSampleIndexList() :
BioDataSet
getClone() :
BioFTQClone
,
BioEst
getCloneLib() :
BioFTQCloneLib
getClusteringCoefficient() :
BioGraph
getCo() :
BioEmblCo
getCodonAminoAcid() :
BioFTQCodon
getCodonSequence() :
BioFTQCodon
getCodonStart() :
BioFTQCodonStart
getColumn() :
BioMultipleSequenceAlignment
,
BioClustal
,
BioEst
getColumnScore() :
BioMultipleSequenceAlignment
,
BioProteinMultipleSequenceAlignment
getColumnScores() :
BioMultipleSequenceAlignment
,
BioProteinMultipleSequenceAlignment
getColumnSocre() :
BioDnaMultipleSequenceAlignment
getColumnSocres() :
BioDnaMultipleSequenceAlignment
getComment() :
BioEst
,
BioPdbHelix
,
BioPdbTurn
getComments() :
BioGde
getCompare() :
BioFTQCompare
getCompareAccessionNumber() :
BioFTQCompare
getCompareSequenceVersion() :
BioFTQCompare
getComplementaryBase() :
BioNucleicAcid
getComplementarySequence() :
BioDnaSequence
getCompnd() :
BioPdbCompnd
getCompoundAccessionNumber() :
BioFTLSingleBaseRange
,
BioEmblSv
,
BioGenBankVersion
getConfidenceScore() :
BioPsiTabInteractionConfidenceScore
,
BioPsiTabInteraction
getConfidenceScoreType() :
BioPsiTabInteractionConfidenceScore
getConflict() :
BioFeatures
,
BioSwissProtFt
getConsensusSequence() :
BioProteinSequenceGlobalAlignment
getConservedColumnPositions() :
BioClustal
getContName() :
BioEst
getControlProbeIndexList() :
BioDataSet
getCorrelationCoefficient() :
BioStatistics
getCountry() :
BioFTQCountry
getCreatedDate() :
BioSwissProtDt
getCreationDate() :
BioGde
getCreator() :
BioGde
getCRegion() :
BioFeatures
getCrossLnk() :
BioSwissProtFt
getCultivar() :
BioFTQCultivar
getCurrentDirectory() :
BioDatabase
getCutSite() :
BioRestrictionEnzymeLibrary
getDa() :
BioPubmedDa
getData() :
BioData
getDatabaseAccession() :
BioPdbDbref
getDatabaseEndingResidueNumber() :
BioPdbDbref
getDatabaseId() :
BioPsiTabInteractionDetectionMethod
,
BioPsiTabInteractionType
getDatabaseIdentifier() :
BioPdbDbref
getDatabaseInitialResidueNumber() :
BioPdbDbref
getDatabaseName() :
BioBlast
,
BioPsiTabInteractionDetectionMethod
,
BioPsiTabInteractionLiteratureReference
,
BioPsiTabInteractionType
,
BioPsiTabInteractorAlias
,
BioPsiTabInteractorTaxonId
getDataBaseName() :
BioEmblSingleDr
,
BioSwissProtSingleDr
getDataSetExcludingControlProbes() :
BioDataSet
getDataStatus() :
BioEmblId
,
BioSwissProtId
getDay() :
BioTime
getDb() :
BioFTQSingleDbXref
getDbLastUpdate() :
BioUrl
getDbName() :
BioFTQUsedIn
getDbref() :
BioPdbDbref
getDbXref() :
BioFTQDbXref
getDcom() :
BioPubmedDcom
getDe() :
BioEmblDe
,
BioSwissProtDe
getDefinition() :
BioGenBankDefinition
getDeletedSequence() :
BioSequence
getDep() :
BioPubmedDep
getDepositedDate() :
BioEmblDt
,
BioGenBankLocus
,
BioPdbHeader
getDepositedDay() :
BioGenBankLocus
,
BioPdbHeader
getDepositedMonth() :
BioGenBankLocus
,
BioPdbHeader
getDepositedYear() :
BioGenBankLocus
,
BioPdbHeader
getDescription() :
BioGde
,
BioScopClass
,
BioScopDomainEntry
,
BioScopFamily
,
BioScopFold
,
BioScopProteinDomain
,
BioScopSpecies
,
BioScopSuperFamily
,
BioSwptFTKSingleActSite
,
BioSwptFTKSingleBinding
,
BioSwptFTKSingleCaBind
,
BioSwptFTKSingleCarbohyd
,
BioSwptFTKSingleChain
,
BioSwptFTKSingleConflict
,
BioSwptFTKSingleCrossLnk
,
BioSwptFTKSingleDiSulfid
,
BioSwptFTKSingleDnaBind
,
BioSwptFTKSingleDomain
,
BioSwptFTKSingleHelix
,
BioSwptFTKSingleInitMet
,
BioSwptFTKSingleLipid
,
BioSwptFTKSingleMetal
,
BioSwptFTKSingleModRes
,
BioSwptFTKSingleMutagen
,
BioSwptFTKSingleNonCons
,
BioSwptFTKSingleNonTer
,
BioSwptFTKSingleNpBind
,
BioSwptFTKSinglePeptide
,
BioSwptFTKSinglePropep
,
BioSwptFTKSingleRepeat
,
BioSwptFTKSingleSeCys
,
BioSwptFTKSingleSignal
,
BioSwptFTKSingleSite
,
BioSwptFTKSingleStrand
,
BioSwptFTKSingleTransit
,
BioSwptFTKSingleTransMem
,
BioSwptFTKSingleTurn
,
BioSwptFTKSingleUnsure
,
BioSwptFTKSingleVariant
,
BioSwptFTKSingleVarSplic
,
BioSwptFTKSingleZnFing
getDetectionMethod() :
BioPsiTabInteraction
getDevStage() :
BioFTQDevStage
getDirection() :
BioFTQDirection
,
BioGde
getDisorder() :
BioProteinDisorderPrediction
getDisorderedResiduePositions() :
BioProteinDisorderPrediction
getDistance() :
BioChain
,
BioPoint
,
BioResidue
getDiSulfid() :
BioSwissProtFt
getDivisionCode() :
BioEmblId
,
BioGenBankLocus
getDLoop() :
BioFeatures
getDnaBind() :
BioSwissProtFt
getDnaType() :
BioEst
getDoi() :
BioSwissProtRx
getDomain() :
BioSwissProtFt
getDomainEntry() :
BioScopSpecies
getDoubleXDataSet() :
BioData
getDp() :
BioPubmedDp
getDr() :
BioSwissProtDr
getDSegment() :
BioFeatures
getDuplicateChainIndices() :
BioProtein
getEc() :
BioPdbSingleCompnd
getECNumber() :
BioFTQECNumber
getEcotype() :
BioFTQEcotype
getEdat() :
BioPubmedEdat
getElement() :
BioElementLibrary
getElementCode() :
BioElement
getElementName() :
BioElement
getEmblFile() :
BioUrl
getEndingBasePosition() :
BioFTLSingleBaseRange
getEndingChainId() :
BioPdbHelix
,
BioPdbStrand
,
BioPdbTurn
getEndingPosition() :
BioSwptFTKSingleActSite
,
BioSwptFTKSingleBinding
,
BioSwptFTKSingleCaBind
,
BioSwptFTKSingleCarbohyd
,
BioSwptFTKSingleChain
,
BioSwptFTKSingleConflict
,
BioSwptFTKSingleCrossLnk
,
BioSwptFTKSingleDiSulfid
,
BioSwptFTKSingleDnaBind
,
BioSwptFTKSingleDomain
,
BioSwptFTKSingleHelix
,
BioSwptFTKSingleInitMet
,
BioSwptFTKSingleLipid
,
BioSwptFTKSingleMetal
,
BioSwptFTKSingleModRes
,
BioSwptFTKSingleMutagen
,
BioSwptFTKSingleNonCons
,
BioSwptFTKSingleNonTer
,
BioSwptFTKSingleNpBind
,
BioSwptFTKSinglePeptide
,
BioSwptFTKSinglePropep
,
BioSwptFTKSingleRepeat
,
BioSwptFTKSingleSeCys
,
BioSwptFTKSingleSignal
,
BioSwptFTKSingleSite
,
BioSwptFTKSingleStrand
,
BioSwptFTKSingleTransit
,
BioSwptFTKSingleTransMem
,
BioSwptFTKSingleTurn
,
BioSwptFTKSingleUnsure
,
BioSwptFTKSingleVariant
,
BioSwptFTKSingleVarSplic
,
BioSwptFTKSingleZnFing
getEndingResidueName() :
BioPdbHelix
,
BioPdbStrand
,
BioPdbTurn
getEndingResidueNumber() :
BioPdbDbref
,
BioPdbHelix
,
BioPdbStrand
,
BioPdbTurn
getEngineered() :
BioPdbSingleCompnd
getEnhancer() :
BioFeatures
getEntriesByGene() :
BioMultipleEmbl
,
BioMultipleGenBank
getEntriesByGenomes() :
BioMultipleEmbl
,
BioMultipleGenBank
getEntriesByOrganism() :
BioMultipleGenBank
,
BioMultipleSwissProt
getEntriesByProtein() :
BioMultipleSwissProt
getEntry() :
BioMultipleEmbl
,
BioMultipleFasta
,
BioMultipleGenBank
,
BioMultiplePubmed
,
BioMultipleSwissProt
,
BioMultipleSequences
getEntryName() :
BioEmblId
,
BioGenBankLocus
,
BioSwissProtId
getEnzymeName() :
BioRestrictionEnzymeLibrary
getEnzymeType() :
BioRestrictionEnzymeLibrary
getError() :
BioEst
getEstimatedLength() :
BioFTQEstimatedLength
getEstNumber() :
BioEst
getEValue() :
BioSingleBlast
getEvidence() :
BioFTQEvidence
getException() :
BioFTQException
getExon() :
BioFeatures
getExpdta() :
BioPdbExpdta
getExpdtaSize() :
BioPdbExpdta
getExpressionSystem() :
BioPdbSingleSource
getExpressionSystemAtccNumber() :
BioPdbSingleSource
getExpressionSystemCell() :
BioPdbSingleSource
getExpressionSystemCellLine() :
BioPdbSingleSource
getExpressionSystemCellularLocation() :
BioPdbSingleSource
getExpressionSystemCommon() :
BioPdbSingleSource
getExpressionSystemGene() :
BioPdbSingleSource
getExpressionSystemOrgan() :
BioPdbSingleSource
getExpressionSystemOrganelle() :
BioPdbSingleSource
getExpressionSystemPlasmid() :
BioPdbSingleSource
getExpressionSystemStrain() :
BioPdbSingleSource
getExpressionSystemTissue() :
BioPdbSingleSource
getExpressionSystemVariant() :
BioPdbSingleSource
getExpressionSystemVector() :
BioPdbSingleSource
getExpressionSystemVectorType() :
BioPdbSingleSource
getExtinctionCoefficient() :
BioProteinSequence
getFamily() :
BioScopSuperFamily
getFamilyId() :
BioScopFamily
getFau() :
BioPubmedFau
,
BioPubmedSingleFau
getFile() :
BioDatabase
getFileByFtp() :
BioUrl
getFileIndex() :
BioDatabase
getFileWithFullPath() :
BioDatabase
getFinalBasePosition() :
BioFTQAntiCodon
,
BioFTQTranslExcept
getFObs() :
BioHkl
getFold() :
BioScopClass
getFoldId() :
BioScopFold
getFragment() :
BioPdbSingleCompnd
,
BioPdbSingleSource
getFrequency() :
BioFTQFrequency
getFSigma() :
BioHkl
getFunction() :
BioFTQFunction
getG() :
BioEmblSq
getGamma() :
BioPdbCryst1
getGap() :
BioFeatures
getGCSignal() :
BioFeatures
getGenBankFile() :
BioUrl
getGene() :
BioFeatures
,
BioFTQGene
,
BioPdbSingleSource
getGeneAccession() :
BioUrl
getGeneId() :
BioUrl
getGeneSynonyms() :
BioUrl
getGenPeptFile() :
BioUrl
getGlobalSequenceIdentity() :
BioProteinStructureAlignment
getGoComponent() :
BioFTQNote
getGoFunction() :
BioFTQNote
getGoProcess() :
BioFTQNote
getGr() :
BioPubmedGr
,
BioPubmedSingleGr
getGroupID() :
BioGde
getGXGSurfaceArea() :
BioAminoAcid
getHaplotype() :
BioFTQHaplotype
getHeight() :
BioPostScript
getHelix() :
BioProteinSecondaryStructurePrediction
,
BioSecondaryStructure
,
BioSwissProtFt
getHelixClass() :
BioPdbHelix
getHelixCoordinates() :
BioPdbHelix
getHelixDirectionCosines() :
BioPdbHelix
,
BioSecondaryStructure
getHelixId() :
BioPdbHelix
getHelixIdIndex() :
BioSecondaryStructure
getHelixLength() :
BioPdb
,
BioPdbHelix
getHelixSequence() :
BioPdbHelix
,
BioSecondaryStructure
getHelixSerialNumber() :
BioPdbHelix
getHiqualStart() :
BioEst
getHiqualStop() :
BioEst
getHours() :
BioTime
getHydropathyIndex() :
BioAminoAcid
getHydrophilicity() :
BioAminoAcid
getHydrophobicity() :
BioAminoAcid
getId() :
BioPsiTabDbref
,
BioPsiTabInteractorTaxonId
getIdBasePairs() :
BioEmblId
getIdentifier() :
BioFTQSingleDbXref
getIdentity() :
BioDnaSequenceGlobalAlignment
,
BioProteinSequenceGlobalAlignment
,
BioDnaSequenceLocalAlignment
,
BioProteinSequenceLocalAlignment
,
BioDnaSequenceOverlapAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
,
BioProteinSecondaryStructureAlignment
getIDna() :
BioFeatures
getInitialBasePosition() :
BioFTQAntiCodon
,
BioFTQTranslExcept
getInitialChainId() :
BioPdbHelix
,
BioPdbStrand
,
BioPdbTurn
getInitialResidueName() :
BioPdbHelix
,
BioPdbStrand
,
BioPdbTurn
getInitialResidueNumber() :
BioPdbDbref
,
BioPdbHelix
,
BioPdbStrand
,
BioPdbTurn
getInitialStateProbabilities() :
BioHmm
getInitMet() :
BioSwissProtFt
getInsert() :
BioEst
getInsertedSequence() :
BioSequence
getInsertionSeq() :
BioFTQInsertionSeq
getInteraction() :
BioPsimiTab
getInteractionDbId() :
BioPsiTabInteractionSourceDb
getInteractionDbName() :
BioPsiTabInteractionSourceDb
getInteractionType() :
BioPsiTabInteraction
,
BioSifInteraction
getInteractorA() :
BioPsiTabInteraction
,
BioSifInteraction
getInteractorAlias() :
BioPsiTabInteractor
getInteractorAlternateId() :
BioPsiTabInteractor
getInteractorB() :
BioPsiTabInteraction
,
BioSifInteraction
getInteractorTaxonId() :
BioPsiTabInteractor
getInteractorUniqueId() :
BioPsiTabInteractor
getIntron() :
BioFeatures
getIObs() :
BioHkl
getIp() :
BioPubmedIp
getIs() :
BioPubmedIs
getISigma() :
BioHkl
getIsolate() :
BioFTQIsolate
getIsolationSource() :
BioFTQIsolationSource
getJid() :
BioPubmedJid
getJSegment() :
BioFeatures
getKeywdsSize() :
BioPdbKeywds
getKeywordsSize() :
BioGenBankKeywords
getKw() :
BioSwissProtKw
getLa() :
BioPubmedLa
getLabel() :
BioFTQLabel
getLabHost() :
BioFTQLabHost
getLambda() :
BioHkl
getLastAnnotationUpdate() :
BioSwissProtDt
getLastAtom() :
BioResidue
getLastAtomName() :
BioResidue
getLastAtomNumber() :
BioResidue
getLastChain() :
BioProtein
getLastChainId() :
BioProtein
getLastResidue() :
BioChain
getLastResidueName() :
BioChain
getLastResidueNumber() :
BioChain
getLastSequenceUpdate() :
BioSwissProtDt
getLastUpdatedDate() :
BioEmblDt
getLibrary() :
BioEst
getLipid() :
BioSwissProtFt
getLiteractureReference() :
BioPsiTabInteraction
getLocalSequenceIdentity() :
BioProteinStructureAlignment
getLocusName() :
BioEmblId
,
BioGenBankLocus
getLocusTag() :
BioFTQLocusTag
getLongName() :
BioGde
getLowerBoundBasePosition() :
BioFTLSingleBase
,
BioFTLSingleSite
getLowerBoundEndingBasePosition() :
BioFTLSingleBaseRange
getLowerBoundStartingBasePosition() :
BioFTLSingleBaseRange
getLr() :
BioPubmedLr
getLtr() :
BioFeatures
getMainChainRmsd() :
BioProteinStructureAlignment
getMap() :
BioFTQMap
getMatchColumnPositions() :
BioClustal
getMatPeptide() :
BioFeatures
getMaximum() :
BioDataSet
,
BioProbeSet
,
BioSampleSet
,
BioStatistics
getMaximumOfYDataSets() :
BioData
getMean() :
BioDataSet
,
BioProbeSet
,
BioSampleSet
,
BioStatistics
getMeanFractionalAreaLoss() :
BioAminoAcid
getMedian() :
BioDataSet
,
BioProbeSet
,
BioSampleSet
,
BioStatistics
getMedLineId() :
BioEmblRx
,
BioSwissProtRx
getMetal() :
BioSwissProtFt
getMethodName() :
BioPsiTabInteractionDetectionMethod
getMethylationBase() :
BioRestrictionEnzymeLibrary
getMethylationSite() :
BioRestrictionEnzymeLibrary
getMethylationType() :
BioRestrictionEnzymeLibrary
getMh() :
BioPubmedMh
,
BioPubmedSingleMh
getMhda() :
BioPubmedMhda
getMinimum() :
BioDataSet
,
BioProbeSet
,
BioSampleSet
,
BioStatistics
getMinimumOfYDataSets() :
BioData
getMinutes() :
BioTime
getMiscBinding() :
BioFeatures
getMiscDifference() :
BioFeatures
getMiscFeature() :
BioFeatures
getMiscRecomb() :
BioFeatures
getMiscRna() :
BioFeatures
getMiscSignal() :
BioFeatures
getMiscStructure() :
BioFeatures
getMissingResidue() :
BioPdbRemark465
getMissingResiduePosition() :
BioPdbRemark465
getMissingResiduePositions() :
BioPdbRemark465
getMissingResidues() :
BioPdbRemark465
getModBase() :
BioFTQModBase
getModifiedBase() :
BioFeatures
getModifiedResidueComment() :
BioPdbModres
getModifiedResidueName() :
BioPdbModres
getModifiedResidueNames() :
BioPdbModres
getModifiedResiduePosition() :
BioPdbModres
getModifiedResiduePositions() :
BioPdbModres
getModRes() :
BioSwissProtFt
getMolarExtinctionCoefficient() :
BioProteinSequence
getMolecularVolume() :
BioAminoAcid
getMolecularWeight() :
BioSwissProtSq
,
BioAminoAcid
,
BioNucleicAcid
,
BioDnaSequence
,
BioProteinSequence
getMolecule() :
BioPdbSingleCompnd
getMoleculeName() :
BioEmblId
,
BioGenBankLocus
getMolId() :
BioPdbSingleCompnd
,
BioPdbSingleSource
getMolType() :
BioFTQMolType
getMonth() :
BioTime
getMRna() :
BioFeatures
getmRnaBase() :
BioNucleicAcid
getmRnaSequence() :
BioDnaSequence
getMultipleProbeSets() :
BioDataSet
getMultipleSampleSets() :
BioDataSet
getMutagen() :
BioSwissProtFt
getMutatedSequence() :
BioSequence
getMutation() :
BioPdbSingleCompnd
getName() :
BioGde
,
BioPsiTabDbref
,
BioPsiTabInteractorAlias
getNcbiGiIdentifier() :
BioGenBankVersion
getNcbiIdentifier() :
BioEmblSv
getNcbiTaxanomyId() :
BioSwissProtOx
getNeighborNodeIds() :
BioGraph
getNodeDistance() :
BioGraph
getNodeDistances() :
BioGraph
getNodeId() :
BioGraph
getNodeIdIndex() :
BioGraph
getNodeIds() :
BioGraph
getNonCons() :
BioSwissProtFt
getNonTer() :
BioSwissProtFt
getNormalizedBfactors() :
BioChain
getNormalizedDataSet() :
BioDataSet
,
BioStatistics
getNormalizedProbeSet() :
BioProbeSet
getNormalizedSampleSet() :
BioSampleSet
getNote() :
BioFTQNote
getNpBind() :
BioSwissProtFt
getNRegion() :
BioFeatures
getNucleicAcid() :
BioNucleicAcidLibrary
getNucleicAcidName() :
BioNucleicAcid
getNucleicAcidPosition() :
BioDnaSubstitutionMatrix
getNumber() :
BioFTQNumber
getNumberOf3PrimeClips() :
BioFeatures
getNumberOf3PrimeUtrs() :
BioFeatures
getNumberOf5PrimeClips() :
BioFeatures
getNumberOf5PrimeUtrs() :
BioFeatures
getNumberOf_10Signals() :
BioFeatures
getNumberOf_35Signals() :
BioFeatures
getNumberOf_s() :
BioFeatures
getNumberOfAcidicAminoAcids() :
BioProteinSequence
getNumberOfActSites() :
BioSwissProtFt
getNumberOfAids() :
BioPubmedAid
getNumberOfAlignments() :
BioBlast
getNumberOfAminoAcids() :
BioSwissProtId
,
BioSwissProtSq
,
BioAminoAcidLibrary
getNumberOfAtoms() :
BioChain
,
BioResidue
getNumberOfAttenuators() :
BioFeatures
getNumberOfAus() :
BioPubmedAu
getNumberOfBasePairs() :
BioGenBankLocus
getNumberOfBasicAminoAcids() :
BioProteinSequence
getNumberOfBindings() :
BioSwissProtFt
getNumberOfCAATSignals() :
BioFeatures
getNumberOfCaBinds() :
BioSwissProtFt
getNumberOfCarbohyds() :
BioSwissProtFt
getNumberOfCarbons() :
BioAminoAcid
getNumberOfCcAllergens() :
BioSwissProtCc
getNumberOfCcAlternativeProducts() :
BioSwissProtCc
getNumberOfCcBioTechnologies() :
BioSwissProtCc
getNumberOfCcCatalyticActivities() :
BioSwissProtCc
getNumberOfCcCautions() :
BioSwissProtCc
getNumberOfCcCoFactors() :
BioSwissProtCc
getNumberOfCcDatabases() :
BioSwissProtCc
getNumberOfCcDevelopmentalStages() :
BioSwissProtCc
getNumberOfCcDiseases() :
BioSwissProtCc
getNumberOfCcDomains() :
BioSwissProtCc
getNumberOfCcEnzymeRegulations() :
BioSwissProtCc
getNumberOfCcFunctions() :
BioSwissProtCc
getNumberOfCcInductions() :
BioSwissProtCc
getNumberOfCcMassSpectrometries() :
BioSwissProtCc
getNumberOfCcMiscellaneous() :
BioSwissProtCc
getNumberOfCcPathWays() :
BioSwissProtCc
getNumberOfCcPharmaceuticals() :
BioSwissProtCc
getNumberOfCcPolymorphisms() :
BioSwissProtCc
getNumberOfCcPtms() :
BioSwissProtCc
getNumberOfCcRnaEditings() :
BioSwissProtCc
getNumberOfCcSimilarities() :
BioSwissProtCc
getNumberOfCcSubCellularLocations() :
BioSwissProtCc
getNumberOfCcSubUnits() :
BioSwissProtCc
getNumberOfCcTissueSpecificities() :
BioSwissProtCc
getNumberOfCdss() :
BioFeatures
getNumberOfChains() :
BioSwissProtFt
,
BioPdbSingleCompnd
getNumberOfClasses() :
BioScop171
getNumberOfColumns() :
BioMatrix
getNumberOfCompnds() :
BioPdbCompnd
getNumberOfConfidenceScores() :
BioPsiTabInteraction
getNumberOfConflicts() :
BioFeatures
,
BioSwissProtFt
getNumberOfCRegions() :
BioFeatures
getNumberOfCrossLnks() :
BioSwissProtFt
getNumberOfDatabaseReferences() :
BioPdbDbref
getNumberOfDbXref() :
BioFTQDbXref
getNumberOfDetectionMethods() :
BioPsiTabInteraction
getNumberOfDiSulfids() :
BioSwissProtFt
getNumberOfDLoops() :
BioFeatures
getNumberOfDnaBinds() :
BioSwissProtFt
getNumberOfDomainEntries() :
BioScopSpecies
getNumberOfDomains() :
BioSwissProtFt
getNumberOfDSegments() :
BioFeatures
getNumberOfEcs() :
BioPdbSingleCompnd
getNumberOfEdges() :
BioGraph
getNumberOfElements() :
BioElementLibrary
getNumberOfEnhancers() :
BioFeatures
getNumberOfEntries() :
BioMultipleFasta
,
BioMultipleEmbl
,
BioMultipleGenBank
,
BioMultiplePubmed
,
BioMultipleSwissProt
,
BioMultipleSequences
getNumberOfExons() :
BioFeatures
getNumberOfFamilies() :
BioScopSuperFamily
getNumberOfFaus() :
BioPubmedFau
getNumberOfFiles() :
BioDatabase
getNumberOfFolds() :
BioScopClass
getNumberOfGaps() :
BioFeatures
,
BioSingleBlast
getNumberOfGCSignals() :
BioFeatures
getNumberOfGenes() :
BioFeatures
,
BioSwissProtGn
getNumberOfGenomes() :
BioMultipleGenBank
,
BioMultipleEmbl
getNumberOfGoComponents() :
BioFTQNote
getNumberOfGoFunctions() :
BioFTQNote
getNumberOfGoProcesses() :
BioFTQNote
getNumberOfGrs() :
BioPubmedGr
getNumberOfHelices() :
BioSecondaryStructure
,
BioProteinSecondaryStructurePrediction
,
BioSecondaryStructure
getNumberOfHelixs() :
BioSwissProtFt
getNumberOfHydrogens() :
BioAminoAcid
getNumberOfIdentities() :
BioProteinSequenceGlobalAlignment
,
BioDnaSequenceRepeatAlignment
,
BioDnaSequenceGlobalAlignment
,
BioDnaSequenceLocalAlignment
,
BioProteinSequenceLocalAlignment
,
BioDnaSequenceOverlapAlignment
,
BioProteinSequenceRepeatAlignment
,
BioSingleBlast
getNumberOfIDnas() :
BioFeatures
getNumberOfInitMets() :
BioSwissProtFt
getNumberOfInteractions() :
BioPsimiTab
,
BioSif
getNumberOfInteractionTypes() :
BioPsiTabInteraction
getNumberOfInteractorAliases() :
BioPsiTabInteractor
getNumberOfInteractorAlternateIds() :
BioPsiTabInteractor
getNumberOfInteractorTaxonIds() :
BioPsiTabInteractor
getNumberOfInteractorUniqueIds() :
BioPsiTabInteractor
getNumberOfIntrons() :
BioFeatures
getNumberOfJSegments() :
BioFeatures
getNumberOfKws() :
BioEmblKw
,
BioSwissProtKw
getNumberOfLipids() :
BioSwissProtFt
getNumberOfLiteractureReferences() :
BioPsiTabInteraction
getNumberOfLtrs() :
BioFeatures
getNumberOfMatPeptides() :
BioFeatures
getNumberOfMetals() :
BioSwissProtFt
getNumberOfMhs() :
BioPubmedMh
getNumberOfMiscBindings() :
BioFeatures
getNumberOfMiscDifferences() :
BioFeatures
getNumberOfMiscFeatures() :
BioFeatures
getNumberOfMiscRecombs() :
BioFeatures
getNumberOfMiscRnas() :
BioFeatures
getNumberOfMiscSignals() :
BioFeatures
getNumberOfMiscStructures() :
BioFeatures
getNumberOfMissingResidues() :
BioPdbRemark465
getNumberOfModifiedBases() :
BioFeatures
getNumberOfModifiedResidues() :
BioPdbModres
getNumberOfModRess() :
BioSwissProtFt
getNumberOfMRnas() :
BioFeatures
getNumberOfMutagens() :
BioSwissProtFt
getNumberOfNitrogens() :
BioAminoAcid
getNumberOfNodeEdges() :
BioGraph
getNumberOfNodes() :
BioGraph
getNumberOfNonCons() :
BioSwissProtFt
getNumberOfNonPolarAminoAcids() :
BioProteinSequence
getNumberOfNonTers() :
BioSwissProtFt
getNumberOfNpBinds() :
BioSwissProtFt
getNumberOfNRegions() :
BioFeatures
getNumberOfNucleicAcids() :
BioNucleicAcidLibrary
getNumberOfOccurencesOfGene() :
BioMultipleEmbl
getNumberOfOccurrences() :
BioSequence
getNumberOfOccurrencesOfGene() :
BioMultipleGenBank
getNumberOfOldSequences() :
BioFeatures
getNumberOfOperons() :
BioFeatures
getNumberOfOrfs() :
BioGenePrediction
getNumberOfOriTs() :
BioFeatures
getNumberOfOxygens() :
BioAminoAcid
getNumberOfPeptides() :
BioSwissProtFt
getNumberOfPhsts() :
BioPubmedPhst
getNumberOfPolarAminoAcids() :
BioProteinSequence
getNumberOfPolyASignals() :
BioFeatures
getNumberOfPolyASites() :
BioFeatures
getNumberOfPositives() :
BioSingleBlast
getNumberOfPrecursorRnas() :
BioFeatures
getNumberOfPrimerBinds() :
BioFeatures
getNumberOfPrimTranscripts() :
BioFeatures
getNumberOfProbes() :
BioDataSet
,
BioSampleSet
getNumberOfPromoters() :
BioFeatures
getNumberOfPropeps() :
BioSwissProtFt
getNumberOfProteinBinds() :
BioFeatures
getNumberOfProteinChains() :
BioProtein
getNumberOfProteinDomains() :
BioScopFamily
getNumberOfPts() :
BioPubmedPt
getNumberOfRas() :
BioEmblRa
,
BioSwissProtRa
getNumberOfRbs() :
BioFeatures
getNumberOfReferences() :
BioEmblReference
,
BioSwissProtReference
getNumberOfReflections() :
BioHkl
getNumberOfRepeatRegions() :
BioFeatures
getNumberOfRepeats() :
BioDnaMultiPatternAlignment
,
BioProteinMultiPatternAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
,
BioSwissProtFt
getNumberOfRepeatUnits() :
BioFeatures
getNumberOfRepOrigins() :
BioFeatures
getNumberOfResidues() :
BioPdbStrand
,
BioChain
getNumberOfRestrictedFragments() :
BioRestrictionMap
getNumberOfRestrictionEnzymes() :
BioRestrictionMap
,
BioRestrictionEnzymeLibrary
getNumberOfRns() :
BioPubmedRn
getNumberOfRows() :
BioMatrix
,
BioData
getNumberOfRRnas() :
BioFeatures
getNumberOfSamples() :
BioDataSet
,
BioProbeSet
getNumberOfSatellites() :
BioFeatures
getNumberOfSbs() :
BioPubmedSb
getNumberOfSCRnas() :
BioFeatures
getNumberOfSecondaryStructureChainIds() :
BioSecondaryStructure
getNumberOfSeCyss() :
BioSwissProtFt
getNumberOfSharedNeighbors() :
BioGraph
getNumberOfSheets() :
BioSecondaryStructure
getNumberOfSignals() :
BioSwissProtFt
getNumberOfSigPeptides() :
BioFeatures
getNumberOfSimilarities() :
BioProteinSequenceGlobalAlignment
,
BioProteinSequenceLocalAlignment
,
BioProteinSequenceRepeatAlignment
getNumberOfSis() :
BioPubmedSi
getNumberOfSites() :
BioSwissProtFt
getNumberOfSNORnas() :
BioFeatures
getNumberOfSNRnas() :
BioFeatures
getNumberOfSourceDatabases() :
BioPsiTabInteraction
getNumberOfSources() :
BioFeatures
,
BioPdbSource
getNumberOfSpaceGroups() :
BioSpaceGroupLibrary
getNumberOfSpecies() :
BioScopProteinDomain
getNumberOfSRegions() :
BioFeatures
getNumberOfSSRs() :
BioSequence
getNumberOfStdCodons() :
BioCodonLibrary
getNumberOfStemLoops() :
BioFeatures
getNumberOfStrands() :
BioSwissProtFt
,
BioProteinSecondaryStructurePrediction
,
BioGenBankLocus
,
BioPdbSheet
getNumberOfSts() :
BioFeatures
getNumberOfSubDirectories() :
BioDatabase
getNumberOfSubDirectoryListRecursively() :
BioDatabase
getNumberOfSubstitutionMatrices() :
BioDnaSubstitutionMatrix
,
BioProteinSubstitutionMatrix
getNumberOfSulphurs() :
BioAminoAcid
getNumberOfSuperFamilies() :
BioScopFold
getNumberOfSymmetryOperators() :
BioSpaceGroup
getNumberOfTATASignals() :
BioFeatures
getNumberOfTerminators() :
BioFeatures
getNumberOfTransitPeptides() :
BioFeatures
getNumberOfTransits() :
BioSwissProtFt
getNumberOfTransMems() :
BioSwissProtFt
getNumberOfTRnas() :
BioFeatures
getNumberOfTurns() :
BioProteinSecondaryStructurePrediction
,
BioSecondaryStructure
,
BioSwissProtFt
,
BioSecondaryStructure
getNumberOfUniqueEntries() :
BioMultipleFasta
getNumberOfUniqueProteinChainIds() :
BioProtein
getNumberOfUnsures() :
BioFeatures
,
BioSwissProtFt
getNumberOfVariants() :
BioSwissProtFt
getNumberOfVariations() :
BioFeatures
getNumberOfVarSplics() :
BioSwissProtFt
getNumberOfVRegions() :
BioFeatures
getNumberOfVSegments() :
BioFeatures
getNumberOfWaters() :
BioProtein
,
BioWater
getNumberOfYDataSets() :
BioData
getNumberOfZnFings() :
BioSwissProtFt
getObservableStates() :
BioHmm
getOccupancy() :
BioAtom
getOffset() :
BioGde
getOg() :
BioEmblOg
,
BioSwissProtOg
getOldLocusTag() :
BioFTQOldLocusTag
getOldSequence() :
BioFeatures
getOperon() :
BioFTQOperon
,
BioFeatures
getOrfs() :
BioGenePrediction
getOrgan() :
BioPdbSingleSource
getOrganelle() :
BioFTQOrganelle
,
BioPdbSingleSource
getOrganism() :
BioFTQOrganism
getOrganismCommon() :
BioPdbSingleSource
getOrganismName() :
BioGenBankSource
,
BioPsiTabInteractorTaxonId
,
BioRestrictionEnzymeLibrary
getOrganismScientific() :
BioPdbSingleSource
getOrganismStrain() :
BioRestrictionEnzymeLibrary
getOrigxnMatrix() :
BioPdbOrigxn
getOrigxnSize() :
BioPdbOrigxn
getOriT() :
BioFeatures
getOs() :
BioSwissProtOs
getOtherDetails() :
BioPdbSingleSource
,
BioPdbSingleCompnd
getOthers() :
BioEmblSq
getOwn() :
BioPubmedOwn
getPcrB() :
BioEst
getPCRConditions() :
BioFTQPCRConditions
getPcrF() :
BioEst
getPdbFile() :
BioUrl
getPdbId() :
BioPdbHeader
getPdbIdsWithChids() :
BioUrl
getPEnd() :
BioEst
getPeptide() :
BioSwissProtFt
getPercentAT() :
BioDnaSequence
getPercentGC() :
BioDnaSequence
getPg() :
BioPubmedPg
getPhenotype() :
BioFTQPhenotype
getPhst() :
BioPubmedSinglePhst
,
BioPubmedPhst
getpKaAmine() :
BioAminoAcid
getpKaCarboxylate() :
BioAminoAcid
getpKaSideChain() :
BioAminoAcid
getPl() :
BioPubmedPl
getPlasmid() :
BioPdbSingleSource
,
BioSwissProtRc
,
BioFTQPlasmid
getPlate() :
BioEst
getPmid() :
BioPubmedPmid
,
BioSwissProtRx
,
BioEmblRx
getPolyA() :
BioEst
getPolyASignal() :
BioFeatures
getPolyASite() :
BioFeatures
getPopVariant() :
BioFTQPopVariant
getPositionsOfAcidicAminoAcids() :
BioProteinSequence
getPositionsOfBasicAminoAcids() :
BioProteinSequence
getPositionsOfNonPolarAminoAcids() :
BioProteinSequence
getPositionsOfPattern() :
BioSequence
getPositionsOfPolarAminoAcids() :
BioProteinSequence
getPositionsOfSSRs() :
BioSequence
getPrecursorRna() :
BioFeatures
getPredictedSequence() :
BioProteinSecondaryStructurePrediction
getPrimaryAccessionNumber() :
BioEmblAc
,
BioSwissProtAc
,
BioGenBankAccession
getPrimaryIdentifier() :
BioEmblSingleDr
,
BioEmblSingleAs
,
BioSwissProtSingleDr
getPrimarySpan() :
BioEmblSingleAs
getPrimerBind() :
BioFeatures
getPrimTranscript() :
BioFeatures
getProbeCorrelationCoefficient() :
BioDataSet
getProbeIndex() :
BioDataSet
getProbeIndexListExcludingAllNullProbes() :
BioDataSet
getProbeName() :
BioProbeSet
,
BioSampleSet
getProbeNameSet() :
BioSampleSet
getProbeReference() :
BioSampleSet
,
BioProbeSet
getProbeReferenceSet() :
BioSampleSet
getProbeRMSD() :
BioDataSet
getProbeSet() :
BioDataSet
getProduct() :
BioFTQProduct
getProfileMatrix() :
BioMultipleSequenceAlignment
,
BioProteinMultipleSequenceAlignment
,
BioDnaMultipleSequenceAlignment
getPromoter() :
BioFeatures
getPropep() :
BioSwissProtFt
getProteinBind() :
BioFeatures
getProteinChain() :
BioProtein
getProteinChainIdIndex() :
BioProtein
getProteinChainIds() :
BioProtein
getProteinChains() :
BioProtein
getProteinConcentration() :
BioProteinSequence
getProteinDomain() :
BioScopFamily
getProteinId() :
BioFTQProteinId
getProteinIds() :
BioUrl
getPrototype() :
BioRestrictionEnzymeLibrary
getPsiSourceDbId() :
BioPsiTabInteractionSourceDb
getPsiSourceDbName() :
BioPsiTabInteractionSourceDb
getPst() :
BioPubmedPst
getPt() :
BioPubmedSinglePt
,
BioPubmedPt
getPublic() :
BioEst
getPublicationId() :
BioPsiTabInteractionLiteratureReference
getPublicationYear() :
BioPsiTabInteractionLiteratureReference
getPubMedFile() :
BioUrl
getPubmedIds() :
BioUrl
getPutID() :
BioEst
getQueryName() :
BioBlast
getRa() :
BioEmblRa
,
BioSwissProtRa
getRbs() :
BioFeatures
getRc() :
BioEmblRc
getReference() :
BioEmblReference
,
BioSwissProtReference
getReferenceDatabases() :
BioPdbDbref
getRepeat() :
BioProteinMultiPatternAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
,
BioSwissProtFt
,
BioDnaMultiPatternAlignment
getRepeatEndingPosition() :
BioDnaMultiPatternAlignment
,
BioProteinMultiPatternAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
getRepeatRegion() :
BioFeatures
getRepeatScore() :
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
getRepeatStartingPosition() :
BioProteinMultiPatternAlignment
,
BioProteinSequenceRepeatAlignment
,
BioDnaSequenceRepeatAlignment
,
BioDnaMultiPatternAlignment
getRepeatUnit() :
BioFeatures
getReplace() :
BioFTQReplace
getRepOrigin() :
BioFeatures
getResidue() :
BioChain
getResidueIndex() :
BioChain
getResidueName() :
BioResidue
getResidueNumber() :
BioResidue
getResidues() :
BioChain
getResolution() :
BioPdbRemark2
getRestrictedFragments() :
BioRestrictionMap
getRestrictedPositions() :
BioRestrictionMap
getRestrictionEnzyme() :
BioRestrictionMap
,
BioRestrictionEnzymeLibrary
getRestrictionEnzymeIndex() :
BioRestrictionMap
getRestrictionEnzymeList() :
BioRestrictionMap
getRestrictionEnzymes() :
BioRestrictionEnzymeLibrary
getRestrictionSite() :
BioRestrictionEnzymeLibrary
getRf() :
BioPubmedRf
getRg() :
BioEmblRg
,
BioSwissProtRg
getRGBColor() :
BioHtml
getRl() :
BioSwissProtRl
,
BioEmblRl
getRMSD() :
BioStatistics
getRn() :
BioPubmedRn
,
BioSwissProtRn
,
BioPubmedSingleRn
,
BioEmblRn
getRotatedAtom() :
BioAtom
getRotatedPoint() :
BioPoint
getRotatedProteinChain() :
BioProteinChain
getRotationMatrix() :
BioSymmetryOperators
getRotoTranslatedAtom() :
BioAtom
getRotoTranslatedPoint() :
BioPoint
getRow() :
BioEst
getRp() :
BioSwissProtRp
,
BioEmblRp
getRptFamily() :
BioFTQRptFamily
getRptType() :
BioFTQRptType
getRptUnit() :
BioFTQRptUnit
getRptUnitFinalPosition() :
BioFTQRptUnit
getRptUnitInitialPosition() :
BioFTQRptUnit
getRptUnitName() :
BioFTQRptUnit
getRRna() :
BioFeatures
getRt() :
BioSwissProtRt
,
BioEmblRt
getSampleCorrelationCoefficient() :
BioDataSet
getSampleIndex() :
BioDataSet
getSampleName() :
BioSampleSet
getSampleRMSD() :
BioDataSet
getSampleSet() :
BioDataSet
getSatellite() :
BioFeatures
getSb() :
BioPubmedSingleSb
,
BioPubmedSb
getScalenMatrix() :
BioPdbScalen
getScalenSize() :
BioPdbScalen
getScopId() :
BioScopDomainEntry
getScopUniqueId() :
BioScopDomainEntry
,
BioScopSpecies
,
BioScopProteinDomain
,
BioScopSuperFamily
,
BioScopClass
,
BioScopFold
,
BioScopFamily
getScore() :
BioDnaSequenceGlobalAlignment
,
BioDnaSequenceLocalAlignment
,
BioDnaSequenceOverlapAlignment
,
BioDnaSequenceRepeatAlignment
,
BioProteinSequenceRepeatAlignment
,
BioSingleBlast
,
BioProteinMultiPatternAlignment
,
BioProteinSequenceGlobalAlignment
,
BioDnaMultiPatternAlignment
,
BioProteinSequenceLocalAlignment
getSCRna() :
BioFeatures
getSecondaryIdentifier() :
BioEmblSingleDr
,
BioSwissProtSingleDr
getSecondaryStructureChainId() :
BioSecondaryStructure
getSecondaryStructureSequence() :
BioSecondaryStructure
getSeconds() :
BioTime
getSecretion() :
BioPdbSingleSource
getSeCys() :
BioSwissProtFt
getSegment() :
BioFTQSegment
getSeqPrimer() :
BioEst
getSeqresChainId() :
BioPdbSeqres
getSeqresNumberOfChainIds() :
BioPdbSeqres
getSeqresSequence() :
BioPdbSeqres
getSeqresSequenceLength() :
BioPdbSeqres
getSeqresSequenceSegment() :
BioPdbSeqres
getSequence() :
BioSwptFTKSingleStrand
,
BioSequence
,
BioSwptFTKSingleSignal
,
BioFTLSingleBaseRange
,
BioFTLBaseRange
,
BioSwptFTKSingleActSite
,
BioSwptFTKSingleLipid
,
BioSwptFTKSingleDnaBind
,
BioSwptFTKSingleHelix
,
BioSwptFTKSingleNonCons
,
BioSwptFTKSingleSite
,
BioSwptFTKSingleTurn
,
BioSwptFTKSingleZnFing
,
BioSwptFTKSingleUnsure
,
BioEst
,
BioSwptFTKSingleDomain
,
BioSwptFTKSingleNpBind
,
BioGde
,
BioSwptFTKSingleBinding
,
BioSwptFTKSingleCarbohyd
,
BioSwptFTKSingleChain
,
BioSwptFTKSingleRepeat
,
BioSwptFTKSinglePropep
,
BioSwptFTKSingleConflict
,
BioSwptFTKSingleCrossLnk
,
BioSwptFTKSingleDiSulfid
,
BioSwptFTKSingleNonTer
,
BioSwptFTKSingleCaBind
,
BioSwptFTKSingleInitMet
,
BioSwptFTKSingleMetal
,
BioSwptFTKSingleModRes
,
BioSwptFTKSingleMutagen
,
BioSwptFTKSinglePeptide
,
BioSwptFTKSingleSeCys
,
BioSwptFTKSingleTransMem
,
BioSwptFTKSingleVarSplic
,
BioSwptFTKSingleVariant
,
BioRestrictionEnzymeLibrary
,
BioSwptFTKSingleTransit
,
BioProteinChain
getSequence1AlignedPosition() :
BioDnaSequenceLocalAlignment
,
BioProteinSequenceLocalAlignment
getSequence2AlignedPosition() :
BioDnaSequenceLocalAlignment
,
BioProteinSequenceLocalAlignment
getSequencedMol() :
BioFTQSequencedMol
getSequenceID() :
BioGde
getSequenceIndex() :
BioMultipleSequences
getSequenceLength() :
BioProteinChain
,
BioSingleBlast
,
BioSequence
getSequenceName() :
BioSingleBlast
,
BioSequence
getSequenceSegment() :
BioProteinChain
,
BioSequence
getSerialNumber() :
BioNucleicAcid
,
BioAminoAcid
getSerotype() :
BioFTQSerotype
getSerovar() :
BioFTQSerovar
getSex() :
BioFTQSex
getSharedNeighborIds() :
BioGraph
getSheet() :
BioSecondaryStructure
getSheetCoordinates() :
BioPdbSheet
getSheetDirectionCosines() :
BioSecondaryStructure
,
BioPdbSheet
getSheetId() :
BioPdbSheet
getSheetIdIndex() :
BioSecondaryStructure
getSheetSequence() :
BioPdbSheet
,
BioSecondaryStructure
,
BioPdbSheet
getShuffledSequence() :
BioSequence
getSi() :
BioPubmedSingleSi
,
BioPubmedSi
getSifInteraction() :
BioSif
getSignal() :
BioSampleSet
,
BioProbeSet
,
BioSwissProtFt
getSignalSet() :
BioSampleSet
,
BioProbeSet
getSigPeptide() :
BioFeatures
getSimilarColumnPositions() :
BioClustal
getSingleLetterCode() :
BioNucleicAcid
,
BioAminoAcid
getSite() :
BioSwissProtFt
getSizeOfStrandVector() :
BioPdbSheet
getSNORna() :
BioFeatures
getSNRna() :
BioFeatures
getSo() :
BioPubmedSo
getsockopt() :
BioSocket
getSource() :
BioFeatures
,
BioGenBankSource
,
BioPdbSource
,
BioEst
getSourceDb() :
BioPsiTabInteraction
getSourceDna() :
BioEst
getSourceInHost() :
BioEst
getSpaceGroup() :
BioPdbCryst1
,
BioHkl
getSpaceGroupName() :
BioSpaceGroupLibrary
getSpecies() :
BioScopProteinDomain
,
BioSwissProtRc
getSpecificHost() :
BioFTQSpecificHost
getSpecimenVoucher() :
BioFTQSpecimenVoucher
getSqBasePairs() :
BioEmblSq
getSRegion() :
BioFeatures
getStandardAminoAcids() :
BioAminoAcidLibrary
getStandardDeviation() :
BioStatistics
,
BioDataSet
,
BioSampleSet
,
BioStatistics
,
BioProbeSet
getStandardName() :
BioFTQStandardName
getStandardResidueName() :
BioPdbModres
getStandardResidueNames() :
BioPdbModres
getStartingBasePosition() :
BioFTLSingleBaseRange
getStartingPosition() :
BioSwptFTKSingleVariant
,
BioSwptFTKSingleZnFing
,
BioSwptFTKSingleTransMem
,
BioSwptFTKSingleRepeat
,
BioSwptFTKSingleNonCons
,
BioSwptFTKSingleInitMet
,
BioSwptFTKSingleSeCys
,
BioSwptFTKSingleCarbohyd
,
BioSwptFTKSingleBinding
,
BioSwptFTKSinglePeptide
,
BioSwptFTKSingleNonTer
,
BioSwptFTKSingleLipid
,
BioSwptFTKSingleDomain
,
BioSwptFTKSingleModRes
,
BioSwptFTKSingleMutagen
,
BioSwptFTKSingleNpBind
,
BioSwptFTKSingleConflict
,
BioSwptFTKSingleActSite
,
BioSwptFTKSingleDnaBind
,
BioSwptFTKSingleTurn
,
BioSwptFTKSingleMetal
,
BioSwptFTKSingleCaBind
,
BioSwptFTKSingleStrand
,
BioSwptFTKSingleCrossLnk
,
BioSwptFTKSingleChain
,
BioSwptFTKSingleSignal
,
BioSwptFTKSingleHelix
,
BioSwptFTKSingleDiSulfid
,
BioSwptFTKSingleVarSplic
,
BioSwptFTKSingleTransit
,
BioSwptFTKSingleUnsure
,
BioSwptFTKSinglePropep
,
BioSwptFTKSingleSite
getStat() :
BioPubmedStat
getStatus() :
BioEst
getStdCodon() :
BioCodonLibrary
getStemLoop() :
BioFeatures
getStrain() :
BioSwissProtRc
,
BioFTQStrain
,
BioPdbSingleSource
getStrand() :
BioSwissProtFt
,
BioPdbSheet
,
BioProteinSecondaryStructurePrediction
getStrandCoordinates() :
BioPdbStrand
getStrandedness() :
BioGde
getStrandName() :
BioEmblId
getStrandSense() :
BioPdbStrand
getStrandSequence() :
BioPdbStrand
getStrandSerialNumber() :
BioPdbStrand
getStrandTopology() :
BioGenBankLocus
getStrandType() :
BioGenBankLocus
getSts() :
BioFeatures
getSubClone() :
BioFTQSubClone
getSubDirectory() :
BioDatabase
getSubDirectoryIndex() :
BioDatabase
getSubDirectoryListRecursively() :
BioDatabase
getSubDirectoryWithFullPath() :
BioDatabase
getSubSpecies() :
BioFTQSubSpecies
getSubstitutionMatrix() :
BioProteinSubstitutionMatrix
,
BioDnaSubstitutionMatrix
getSubstitutionMatrixName() :
BioProteinSubstitutionMatrix
,
BioDnaSubstitutionMatrix
getSubstitutionValue() :
BioProteinSubstitutionMatrix
,
BioDnaSubstitutionMatrix
getSubStrain() :
BioFTQSubStrain
getSuperFamily() :
BioScopFold
getSuperFamilyId() :
BioScopSuperFamily
getSwissProtFile() :
BioUrl
getSymmetryOperator() :
BioSpaceGroup
getSynonym() :
BioPdbSingleCompnd
getSynthetic() :
BioPdbSingleSource
getT() :
BioEmblSq
getTa() :
BioPubmedTa
getTATASignal() :
BioFeatures
getTaxanomy() :
BioGenBankSource
getTaxonId() :
BioPsiTabInteractor
getTerminator() :
BioFeatures
getTertiaryIdentifier() :
BioSwissProtSingleDr
getThreeLetterCode() :
BioAminoAcid
getTi() :
BioPubmedTi
getTissue() :
BioSwissProtRc
,
BioPdbSingleSource
getTissueLib() :
BioFTQTissueLib
getTissueType() :
BioFTQTissueType
getTm() :
BioDnaSequence
getTopologicalCoefficient() :
BioGraph
getTorsionAngle() :
BioResidue
getTotal() :
BioStatistics
getTpaSpan() :
BioEmblSingleAs
getTransit() :
BioSwissProtFt
getTransitPeptide() :
BioFeatures
getTranslatedAtom() :
BioAtom
getTranslatedPoint() :
BioPoint
getTranslatedSequence() :
BioDnaSequence
getTranslation() :
BioFTQTranslation
getTranslationMatrix() :
BioSymmetryOperators
getTranslExceptAminoAcid() :
BioFTQTranslExcept
getTranslTableNumber() :
BioFTQTranslTable
getTransMem() :
BioSwissProtFt
getTransposedMatrix() :
BioMatrix
getTransposon() :
BioSwissProtRc
,
BioFTQTransposon
getTRna() :
BioFeatures
getTt() :
BioPubmedTt
getTurn() :
BioSecondaryStructure
,
BioProteinSecondaryStructurePrediction
,
BioSwissProtFt
getTurnCoordinates() :
BioPdbTurn
getTurnId() :
BioPdbTurn
getTurnIdIndex() :
BioSecondaryStructure
getTurnLength() :
BioPdbTurn
getTurnSequence() :
BioSecondaryStructure
,
BioPdbTurn
getTurnSerialNumber() :
BioPdbTurn
getType() :
BioGde
,
BioPsiTabInteractorAlias
,
BioPsiTabInteractionType
,
BioEst
getUnAmbigousRestrictionEnzymes() :
BioRestrictionEnzymeLibrary
getUniqueAmbigousRestrictionEnzymes() :
BioRestrictionEnzymeLibrary
getUniqueEntries() :
BioMultipleFasta
getUniqueGenes() :
BioMultipleGenBank
getUniqueId() :
BioPsiTabInteractor
getUniqueOrganisms() :
BioMultipleSwissProt
,
BioMultipleGenBank
getUniqueProteinChainIds() :
BioProtein
getUniqueUnAmbigousRestrictionEnzymes() :
BioRestrictionEnzymeLibrary
getUnitVectorCoordinate1() :
BioSymmetryUnitVector
getUnitVectorCoordinate2() :
BioSymmetryUnitVector
getUnitVectorCoordinate3() :
BioSymmetryUnitVector
getUnitVectorTranslation() :
BioSymmetryUnitVector
getUnsure() :
BioFeatures
,
BioSwissProtFt
getUpperBoundBasePosition() :
BioFTLSingleBase
,
BioFTLSingleSite
getUpperBoundEndingBasePosition() :
BioFTLSingleBaseRange
getUpperBoundStartingBasePosition() :
BioFTLSingleBaseRange
getUsedIn() :
BioFTQUsedIn
getUsedInLabel() :
BioFTQUsedIn
getVariance() :
BioStatistics
getVariant() :
BioPdbSingleSource
,
BioSwissProtFt
getVariation() :
BioFeatures
getVariety() :
BioFTQVariety
getVarSplic() :
BioSwissProtFt
getVersionNumber() :
BioFTQProteinId
,
BioGenBankVersion
getVi() :
BioPubmedVi
getVolume() :
BioHkl
getVRegion() :
BioFeatures
getVSegment() :
BioFeatures
getWater() :
BioProtein
,
BioWater
getWaterIndex() :
BioWater
getWaterMolecule() :
BioProtein
getWaterNumber() :
BioWater
getWeek() :
BioTime
getWidth() :
BioPostScript
getX() :
BioPoint
getXDataSet() :
BioData
getY() :
BioPoint
getYDataSet() :
BioData
getYear() :
BioTime
getZ() :
BioPoint
,
BioPdbCryst1
getZnFing() :
BioSwissProtFt
All
Classes
Files
Functions
Variables
Typedefs
Enumerations
Enumerator
Friends
Defines
Generated on Fri Sep 13 2013 16:43:27 for BioInt by
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