BioProteinSecondaryStructureAlignment Class Reference

#include <BioProteinSecondaryStructureAlignment.h>

List of all members.

Public Member Functions
	BioProteinSecondaryStructureAlignment ()
	BioProteinSecondaryStructureAlignment (string, string, int GP=-11)
void	setSequence1 (string)
void	setSequence2 (string)
void	showAlignment (ostream &=cout)
void	setGapPenalty (int GP=-11)
float	getIdentity ()

---

Constructor & Destructor Documentation

BioProteinSecondaryStructureAlignment::BioProteinSecondaryStructureAlignment

(

)

BioProteinSecondaryStructureAlignment::BioProteinSecondaryStructureAlignment	(	string	,
		string	,
		int	GP = -11
	)

---

Member Function Documentation

float BioProteinSecondaryStructureAlignment::getIdentity

(

)

void BioProteinSecondaryStructureAlignment::setGapPenalty

(

int

GP = -11

)

void BioProteinSecondaryStructureAlignment::setSequence1

(

string

)

void BioProteinSecondaryStructureAlignment::setSequence2

(

string

)

void BioProteinSecondaryStructureAlignment::showAlignment

(

ostream &

= cout

)

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The documentation for this class was generated from the following file:

• BioProteinSecondaryStructureAlignment.h