BioAtom.h File Reference

#include <fstream>
#include <string>
#include <cmath>
#include <vector>
#include "BioUtilities.h"
#include "BioHelperClass.h"
#include "BioPoint.h"

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Classes
class	BioAtom
Functions
float	BioDistance (const BioAtom &, const BioAtom &)
float	BioAngle (const BioAtom &, const BioAtom &, const BioAtom &)
float	BioTorsion (const BioAtom &, const BioAtom &, const BioAtom &, const BioAtom &)
vector< float >	BioDirectionCosines (const BioAtom &, const BioAtom &)
vector< float >	BioVectorCrossProduct (const BioAtom &, const BioAtom &, const BioAtom &)
vector< float >	BioVectorCrossProduct (const BioAtom &, const BioAtom &)
BioAtom	BioDifferenceVector (const BioAtom &, const BioAtom &)
float	BioDotProduct (const BioAtom &, const BioAtom &)
float	BioDotMagnitude (const BioAtom &, const BioAtom &)
BioAtom	BioNormalize (const BioAtom &)
BioMatrix	helix (BioAtom c1, BioAtom c2, BioAtom c3, BioAtom c4)
void	helixAxisDirectionCosines (BioAtom c1, BioAtom c2, BioAtom c3, BioAtom c4, float &l, float &m, float &n)

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Function Documentation

float BioAngle	(	const BioAtom &	,
		const BioAtom &	,
		const BioAtom &
	)

BioAtom BioDifferenceVector	(	const BioAtom &	,
		const BioAtom &
	)

vector<float> BioDirectionCosines	(	const BioAtom &	,
		const BioAtom &
	)

float BioDistance	(	const BioAtom &	,
		const BioAtom &
	)

float BioDotMagnitude	(	const BioAtom &	,
		const BioAtom &
	)

float BioDotProduct	(	const BioAtom &	,
		const BioAtom &
	)

BioAtom BioNormalize

(

const BioAtom &

)

float BioTorsion	(	const BioAtom &	,
		const BioAtom &	,
		const BioAtom &	,
		const BioAtom &
	)

vector<float> BioVectorCrossProduct	(	const BioAtom &	,
		const BioAtom &	,
		const BioAtom &
	)

vector<float> BioVectorCrossProduct	(	const BioAtom &	,
		const BioAtom &
	)

BioMatrix helix	(	BioAtom	c1,
		BioAtom	c2,
		BioAtom	c3,
		BioAtom	c4
	)

void helixAxisDirectionCosines	(	BioAtom	c1,
		BioAtom	c2,
		BioAtom	c3,
		BioAtom	c4,
		float &	l,
		float &	m,
		float &	n
	)