BioDnaSequenceDotPlot Class Reference

#include <BioDnaSequenceDotPlot.h>

List of all members.

Public Member Functions
	BioDnaSequenceDotPlot ()
	BioDnaSequenceDotPlot (BioDnaSequence, BioDnaSequence, string="IDENTITY")
	BioDnaSequenceDotPlot (BioDnaSequence, string, string="IDENTITY")
	BioDnaSequenceDotPlot (BioEmbl, BioEmbl, string="IDENTITY")
	BioDnaSequenceDotPlot (BioEmbl, string, string="IDENTITY")
	BioDnaSequenceDotPlot (BioGenBank, BioGenBank, string="IDENTITY")
	BioDnaSequenceDotPlot (BioGenBank, string, string="IDENTITY")
	BioDnaSequenceDotPlot (BioFasta, BioFasta, string="IDENTITY")
	BioDnaSequenceDotPlot (BioFasta, string, string="IDENTITY")
	BioDnaSequenceDotPlot (string, string, string="IDENTITY")
void	showDotPlot (BioPostScript &ps, unsigned int startX_=80, unsigned int startY_=200, unsigned int size_=500)
void	setPlotColor (unsigned int r, unsigned int g, unsigned int b)
void	setLabels (string, string, string)
void	setWindowSize (unsigned int windowSize)
void	setStringency (unsigned int stringency)

---

Constructor & Destructor Documentation

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot

(

)

[inline]

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioDnaSequence	,
		BioDnaSequence	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioDnaSequence	,
		string	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioEmbl	,
		BioEmbl	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioEmbl	,
		string	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioGenBank	,
		BioGenBank	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioGenBank	,
		string	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioFasta	,
		BioFasta	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	BioFasta	,
		string	,
		string	= "IDENTITY"
	)

BioDnaSequenceDotPlot::BioDnaSequenceDotPlot	(	string	,
		string	,
		string	= "IDENTITY"
	)

---

Member Function Documentation

void BioDnaSequenceDotPlot::setLabels	(	string	,
		string	,
		string
	)

void BioDnaSequenceDotPlot::setPlotColor	(	unsigned int	r,
		unsigned int	g,
		unsigned int	b
	)

void BioDnaSequenceDotPlot::setStringency

(

unsigned int

stringency

)

void BioDnaSequenceDotPlot::setWindowSize

(

unsigned int

windowSize

)

void BioDnaSequenceDotPlot::showDotPlot	(	BioPostScript &	ps,
		unsigned int	startX_ = 80,
		unsigned int	startY_ = 200,
		unsigned int	size_ = 500
	)

---

The documentation for this class was generated from the following file:

• BioDnaSequenceDotPlot.h