BioInt
1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
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BioDnaMultipleSequenceAlignment Member List
This is the complete list of members for
BioDnaMultipleSequenceAlignment
, including all inherited members.
BioDnaMultipleSequenceAlignment
()
BioDnaMultipleSequenceAlignment
BioDnaMultipleSequenceAlignment
(BioMultipleFasta &)
BioDnaMultipleSequenceAlignment
BioDnaMultipleSequenceAlignment
(BioMultipleGenBank &)
BioDnaMultipleSequenceAlignment
BioDnaMultipleSequenceAlignment
(BioMultipleEmbl &)
BioDnaMultipleSequenceAlignment
BioMultipleSequenceAlignment
()
BioMultipleSequenceAlignment
[private]
BioMultipleSequenceAlignment
(BioMultipleFasta &)
BioMultipleSequenceAlignment
[private]
BioMultipleSequenceAlignment
(BioMultipleGenBank &)
BioMultipleSequenceAlignment
[private]
BioMultipleSequenceAlignment
(BioMultipleEmbl &)
BioMultipleSequenceAlignment
[private]
BioMultipleSequenceAlignment
(BioMultipleSwissProt &)
BioMultipleSequenceAlignment
[private]
getAlignedSequence
(int i)
BioMultipleSequenceAlignment
[private]
getAlignedSequenceInFasta
(int i)
BioMultipleSequenceAlignment
[private]
getAlignedSequenceName
(int i)
BioMultipleSequenceAlignment
[private]
getAlignedSequences
()
BioMultipleSequenceAlignment
[private]
getAlignedSequencesInMultipleFasta
()
BioMultipleSequenceAlignment
[private]
getColumn
(int i)
BioMultipleSequenceAlignment
[private]
getColumnScore
(int col_index, string s)
BioMultipleSequenceAlignment
[private]
getColumnScores
(string type)
BioMultipleSequenceAlignment
[private]
getColumnSocre
(int index)
BioDnaMultipleSequenceAlignment
getColumnSocres
()
BioDnaMultipleSequenceAlignment
getProfileMatrix
()
BioDnaMultipleSequenceAlignment
BioMultipleSequenceAlignment::getProfileMatrix
(string s)
BioMultipleSequenceAlignment
[private]
showAlignment
(ostream &=cout)
BioMultipleSequenceAlignment
[private]
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