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BioInt
1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
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| BioAtom() | BioAtom | |
| BioAtom(const string &) | BioAtom | |
| BioAtom(const BioAtom &) | BioAtom | |
| BioAtom(const unsigned long atnum_, const string atname_, const BioPoint &, const float oc1=1.0, const float bf1=15.0, const string atrec="ATOM ") | BioAtom | |
| BioAtom(const unsigned long atnumber, const string atname, const float x1, const float y1, const float z1, const float oc=1.0, const float bf=15.0, const string atrec="ATOM ") | BioAtom | |
| BioPoint() | BioPoint | |
| BioPoint(const BioPoint &) | BioPoint | |
| BioPoint(const float x1, const float y1, const float z1) | BioPoint | |
| getAtomName() const | BioAtom | |
| getAtomNumber() const | BioAtom | |
| getAtomRecord() const | BioAtom | |
| getBfactor() const | BioAtom | |
| getDistance(const BioPoint &) | BioPoint | |
| getDistance(const float, const float, const float) | BioPoint | |
| getOccupancy() const | BioAtom | |
| getRotatedAtom(const float **a_) | BioAtom | |
| getRotatedAtom(const float a_, const char axis_) | BioAtom | |
| getRotatedPoint(const float **a_) | BioPoint | |
| getRotatedPoint(const BioMatrix &a_) | BioPoint | |
| getRotatedPoint(const float th, const char axis) | BioPoint | |
| getRotoTranslatedAtom(const float **a_, const float *b_) | BioAtom | |
| getRotoTranslatedAtom(const float a_, const char axis_, const float *b_) | BioAtom | |
| getRotoTranslatedPoint(const float **a_, const float *b_) | BioPoint | |
| getRotoTranslatedPoint(const float th, const char ax, const float *b_) | BioPoint | |
| getTranslatedAtom(const float *a_) | BioAtom | |
| getTranslatedPoint(const float *a_) | BioPoint | |
| getX() const | BioPoint | |
| getY() const | BioPoint | |
| getZ() const | BioPoint | |
| operator<(const BioAtom &, const BioAtom &) | BioAtom | [friend] |
| operator<<(ostream &os, const BioAtom &ip) | BioAtom | [friend] |
| BioPoint::operator<<(ostream &os, const BioPoint &) | BioPoint | [friend] |
| operator=(const BioAtom &) | BioAtom | |
| BioPoint::operator=(const BioPoint &) | BioPoint | |
| operator==(const BioAtom &, const BioAtom &) | BioAtom | [friend] |
| operator>(const BioAtom &, const BioAtom &) | BioAtom | [friend] |
| setAtom(const unsigned long atnumber, const string atname, const float x1, const float y1, const float z1, const float oc=1.0, const float bf=15.0, const string atrec="ATOM ") | BioAtom | |
| setAtomName(string) | BioAtom | |
| setAtomNumber(unsigned long) | BioAtom | |
| setBfactor(float) | BioAtom | |
| setOccupancy(float) | BioAtom | |
| setX(float) | BioPoint | |
| setXYZ(float, float, float) | BioPoint | |
| setY(float) | BioPoint | |
| setZ(float) | BioPoint | |
| showAtom(ostream &=cout, string="AAA", int=0, char='A') | BioAtom | |
| showPoint(ostream &os=cout) const | BioPoint | |
| x_ | BioPoint | [protected] |
| y_ | BioPoint | [protected] |
| z_ | BioPoint | [protected] |