BioInt
1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
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00001 #ifndef BIODNAMULTIPLESEQUENCEALIGNMENT_H 00002 #define BIODNAMULTIPLESEQUENCEALIGNMENT_H 00003 00004 #include "BioMultipleSequenceAlignment.h" 00005 00006 class BioDnaMultipleSequenceAlignment: BioMultipleSequenceAlignment 00007 { 00008 public: 00009 BioDnaMultipleSequenceAlignment(); 00010 BioDnaMultipleSequenceAlignment(BioMultipleFasta& ); 00011 BioDnaMultipleSequenceAlignment(BioMultipleGenBank& ); 00012 BioDnaMultipleSequenceAlignment(BioMultipleEmbl& ); 00013 BioMatrix getProfileMatrix(); 00014 int getColumnSocre(int index); 00015 vector<int> getColumnSocres(); 00016 }; 00017 00018 #endif