BioInt  1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
BioDnaMultipleSequenceAlignment.h
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00001 #ifndef BIODNAMULTIPLESEQUENCEALIGNMENT_H
00002 #define BIODNAMULTIPLESEQUENCEALIGNMENT_H
00003 
00004 #include "BioMultipleSequenceAlignment.h"
00005 
00006 class BioDnaMultipleSequenceAlignment: BioMultipleSequenceAlignment
00007 {
00008     public:
00009         BioDnaMultipleSequenceAlignment();
00010         BioDnaMultipleSequenceAlignment(BioMultipleFasta& );
00011         BioDnaMultipleSequenceAlignment(BioMultipleGenBank& );
00012         BioDnaMultipleSequenceAlignment(BioMultipleEmbl& );
00013         BioMatrix getProfileMatrix();
00014         int getColumnSocre(int index);
00015         vector<int> getColumnSocres();
00016 };
00017 
00018 #endif
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