BioInt
1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
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00001 /**************************************************************************** 00002 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 00003 The BioBhasha : The Biologist's Programming Language 00004 Version 1.0 (19th December 2001) 00005 Prasad, B.V.L.S. 00006 Contact: burrashiva@yahoo.com 00007 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 00008 *****************************************************************************/ 00009 #ifndef BIOEMBLSQ_H 00010 #define BIOEMBLSQ_H 00011 00012 using namespace std; 00013 #include <string> 00014 #include "BioSequence.h" 00015 #include <fstream> 00016 #include <iostream> 00017 00018 class BioEmblSq 00019 { 00020 string sq_; 00021 public: 00022 BioEmblSq(); 00023 BioEmblSq(const string& sq); 00024 void setSq(string &); 00025 long getA(); 00026 long getC(); 00027 long getG(); 00028 long getT(); 00029 long getOthers(); 00030 long getSqBasePairs(); 00031 void showSq(ostream & = cout); 00032 }; 00033 00034 #endif