BioInt  1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
BioEmblSq.h
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00001 /****************************************************************************
00002 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
00003 The BioBhasha : The Biologist's Programming Language 
00004 Version 1.0 (19th December 2001)
00005 Prasad, B.V.L.S.
00006 Contact: burrashiva@yahoo.com
00007 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
00008 *****************************************************************************/
00009 #ifndef BIOEMBLSQ_H
00010 #define BIOEMBLSQ_H
00011 
00012 using namespace std;
00013 #include <string>
00014 #include "BioSequence.h"
00015 #include <fstream>
00016 #include <iostream>
00017 
00018 class BioEmblSq 
00019 {
00020   string sq_;   
00021   public:
00022     BioEmblSq();
00023     BioEmblSq(const string& sq);
00024     void setSq(string &);
00025     long getA();
00026     long getC();
00027     long getG();
00028     long getT();
00029     long getOthers();
00030     long getSqBasePairs();
00031     void showSq(ostream & = cout);
00032 };
00033 
00034 #endif
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