BioPdbSeqres.h

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/****************************************************************************
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
The BioBhasha : The Biologist's Programming Language 
Version 1.0 (19th December 2001)
Prasad, B.V.L.S.
Contact: burrashiva@yahoo.com
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
*****************************************************************************/
#ifndef BIOPDBSEQRES_H 
#define BIOPDBSEQRES_H

using namespace std;

#include <string>
#include <vector>
#include <fstream>
#include <iostream>
#include <algorithm>

class BioPdbSeqres
{

        vector<string>seqres_;
public:
        BioPdbSeqres(const string& ti_);

        void showSeqres(ostream& = cout);
        void showSeqres(char,ostream& = cout);

        void showSeqresChainIds(ostream& = cout);
        bool findSeqresChainId(char );

        string getSeqresSequence(char );
        string getSeqresSequenceSegment(char, int ,int);
        int getSeqresSequenceLength(char );

        int getSeqresNumberOfChainIds();
        char getSeqresChainId(int chainIdIndex);

        

};

#endif