BioSwptFTKSingleTransit.h

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#ifndef BIOSWPTFTKSINGLETRANSIT_H
#define BIOSWPTFTKSINGLETRANSIT_H

#include <iostream>
#include <string>
#include <fstream>
#include "BioProteinSequence.h"
using namespace std;

class BioSwptFTKSingleTransit
{
  int from_,to_;
        string desc_;
        bool startPartial_, endPartial_;
    public:
        BioSwptFTKSingleTransit();
        BioSwptFTKSingleTransit(const string & fn);
        
        void setSwptFTKSingleTransit(string &);
        int getStartingPosition();
        int getEndingPosition();
        string getDescription();
  bool findTransit(const string&);
  bool findPartial();
  string getSequence(BioProteinSequence &);                     
private:                
                        
                        
friend bool operator >(const BioSwptFTKSingleTransit& , const BioSwptFTKSingleTransit&);
friend bool operator <(const BioSwptFTKSingleTransit& , const BioSwptFTKSingleTransit&);
friend bool operator ==(const BioSwptFTKSingleTransit& , const BioSwptFTKSingleTransit&);
                        
                        
};                       
                        
                        
#endif