BioInt  1.02.00
BioInt: An integrative biological object-oriented application framework and interpreter
BioProteinSequenceDotPlot Class Reference

#include <BioProteinSequenceDotPlot.h>

List of all members.

Public Member Functions

 BioProteinSequenceDotPlot ()
 BioProteinSequenceDotPlot (BioProteinSequence, BioProteinSequence, string="IDENTITY")
 BioProteinSequenceDotPlot (BioProteinSequence, string, string="IDENTITY")
 BioProteinSequenceDotPlot (BioSwissProt, BioSwissProt, string="IDENTITY")
 BioProteinSequenceDotPlot (BioSwissProt, string, string="IDENTITY")
 BioProteinSequenceDotPlot (BioFasta, BioFasta, string="IDENTITY")
 BioProteinSequenceDotPlot (BioFasta, string, string="IDENTITY")
 BioProteinSequenceDotPlot (string, string, string="IDENTITY")
void showDotPlot (BioPostScript &ps, unsigned int startX_=80, unsigned int startY_=200, unsigned int size_=500)
void setPlotColor (unsigned int r, unsigned int g, unsigned int b)
void setLabels (string, string, string)
void setWindowSize (unsigned int windowSize)
void setStringency (unsigned int stringency)

Constructor & Destructor Documentation

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot ( BioSwissProt  ,
string  ,
string  = "IDENTITY" 
BioProteinSequenceDotPlot::BioProteinSequenceDotPlot ( BioFasta  ,
string  ,
string  = "IDENTITY" 
BioProteinSequenceDotPlot::BioProteinSequenceDotPlot ( string  ,
string  ,
string  = "IDENTITY" 

Member Function Documentation

void BioProteinSequenceDotPlot::setLabels ( string  ,
string  ,
void BioProteinSequenceDotPlot::setPlotColor ( unsigned int  r,
unsigned int  g,
unsigned int  b 
void BioProteinSequenceDotPlot::setStringency ( unsigned int  stringency)
void BioProteinSequenceDotPlot::setWindowSize ( unsigned int  windowSize)
void BioProteinSequenceDotPlot::showDotPlot ( BioPostScript ps,
unsigned int  startX_ = 80,
unsigned int  startY_ = 200,
unsigned int  size_ = 500 

The documentation for this class was generated from the following file:
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