BioProteinSequenceDotPlot Class Reference

#include <BioProteinSequenceDotPlot.h>

List of all members.

Public Member Functions
	BioProteinSequenceDotPlot ()
	BioProteinSequenceDotPlot (BioProteinSequence, BioProteinSequence, string="IDENTITY")
	BioProteinSequenceDotPlot (BioProteinSequence, string, string="IDENTITY")
	BioProteinSequenceDotPlot (BioSwissProt, BioSwissProt, string="IDENTITY")
	BioProteinSequenceDotPlot (BioSwissProt, string, string="IDENTITY")
	BioProteinSequenceDotPlot (BioFasta, BioFasta, string="IDENTITY")
	BioProteinSequenceDotPlot (BioFasta, string, string="IDENTITY")
	BioProteinSequenceDotPlot (string, string, string="IDENTITY")
void	showDotPlot (BioPostScript &ps, unsigned int startX_=80, unsigned int startY_=200, unsigned int size_=500)
void	setPlotColor (unsigned int r, unsigned int g, unsigned int b)
void	setLabels (string, string, string)
void	setWindowSize (unsigned int windowSize)
void	setStringency (unsigned int stringency)

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Constructor & Destructor Documentation

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot

(

)

[inline]

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	BioProteinSequence	,
		BioProteinSequence	,
		string	= "IDENTITY"
	)

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	BioProteinSequence	,
		string	,
		string	= "IDENTITY"
	)

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	BioSwissProt	,
		BioSwissProt	,
		string	= "IDENTITY"
	)

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	BioSwissProt	,
		string	,
		string	= "IDENTITY"
	)

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	BioFasta	,
		BioFasta	,
		string	= "IDENTITY"
	)

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	BioFasta	,
		string	,
		string	= "IDENTITY"
	)

BioProteinSequenceDotPlot::BioProteinSequenceDotPlot	(	string	,
		string	,
		string	= "IDENTITY"
	)

---

Member Function Documentation

void BioProteinSequenceDotPlot::setLabels	(	string	,
		string	,
		string
	)

void BioProteinSequenceDotPlot::setPlotColor	(	unsigned int	r,
		unsigned int	g,
		unsigned int	b
	)

void BioProteinSequenceDotPlot::setStringency

(

unsigned int

stringency

)

void BioProteinSequenceDotPlot::setWindowSize

(

unsigned int

windowSize

)

void BioProteinSequenceDotPlot::showDotPlot	(	BioPostScript &	ps,
		unsigned int	startX_ = 80,
		unsigned int	startY_ = 200,
		unsigned int	size_ = 500
	)

---

The documentation for this class was generated from the following file:

• BioProteinSequenceDotPlot.h