d3/da9/_bio_statistics__orig_8h_source.html

00001 /****************************************************************************
00002 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
00003 The BioBhasha : A Programming Language for Biologist
00004 Version 1.0 (19th December 2001)
00005 Dr. Prasad, B.V.L.S.
00006 Version 1.1 (23th January 2003)
00007 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
00008 *****************************************************************************/
00009 #ifndef BIOSTATISTICS_H
00010 #define BIOSTATISTICS_H
00011
00012 #include <vector>
00013 #include <numeric>
00014 #include <algorithm>
00015 #include <cmath>
00016
00017 using namespace std;
00018
00019 class BioStatistics
00020 {
00021
00022 public:
00023
00024         static float getMedian(const vector<float >&x );
00025         static double getMedian(const vector<double >&x );
00026         static float getMedian(const vector<int >&x );
00027         static float getMedian(const vector<long >&x );
00028
00029 static  long getTotal(const vector<long>&);
00030 static  long getTotal(const vector<int>&);
00031 static  float getTotal(const vector<float>&);
00032 static  double getTotal(const vector<double>&);
00033
00034 static  long getMaximum(const vector<long>&);
00035 static  long getMaximum(const vector<int>&);
00036 static  float getMaximum(const vector<float>&);
00037 static  double getMaximum(const vector<double>&);
00038
00039 static  long getMinimum(const vector<long>&);
00040 static  long getMinimum(const vector<int>&);
00041 static  float getMinimum(const vector<float>&);
00042 static  double getMinimum(const vector<double>&);
00043
00044 static  float getMean(const vector<long>&);
00045 static  float getMean(const vector<int>&);
00046 static  float getMean(const vector<float>&);
00047 static  double getMean(const vector<double>&);
00048
00049 static  float getStandardDeviation(const vector<long>& );
00050 static  float getStandardDeviation(const vector<int>& );
00051 static  float getStandardDeviation(const vector<float>& );
00052 static  double getStandardDeviation(const vector<double>& );
00053
00054 static  float getVariance(const vector<long>& );
00055 static  float getVariance(const vector<int>& );
00056 static  float getVariance(const vector<float>& );
00057 static  double getVariance(const vector<double>& );
00058
00059 static  vector<float> getNormalizedDataSet(const vector<long>& );
00060 static  vector<float> getNormalizedDataSet(const vector<float>&);
00061 static  vector<float> getNormalizedDataSet(const vector<int>&);
00062 static  vector<double> getNormalizedDataSet(const vector<double>&);
00063
00064 static float getRMSD(const vector<long>& , const vector<long>& );
00065 static float getRMSD(const vector<int>& , const vector<int>& );
00066 static float getRMSD(const vector<float>& , const vector<float>& );
00067 static double getRMSD(const vector<double>& , const vector<double>& );
00068
00069 static float getCorrelationCoefficient(const vector<long>& , const vector<long>& );
00070 static float getCorrelationCoefficient(const vector<int>& , const vector<int>& );
00071 static float getCorrelationCoefficient(const vector<float>& , const vector<float>& );
00072 static double getCorrelationCoefficient(const vector<double>& , const vector<double>& );
00073 };
00074
00075
00076 #endif